miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|256973232|gb|GR960797.1|GR960797 TTTTTTTTTTTTTTTTTTCGGGAGAAAAATGTTTAATGCGTTTTTTTCCGATCTTAACTGATTTAAATAATGTTTATTTG
TTTCTATAATGTACAACTACAATTGTTTACACCCTAAGCCAGTACATTCCAGCGCGGATCCTAGTGTAGTCTGGCAGTGC
TTCAGTAGGCCCAACGGTGGCCACAGCGGGGCAGCGGTCGTACAGGTACTTGTAGCACACATCACGCACATTCTGCACAG
AGACAGCTTCAATACGGGCATCAAGCTCATGGATGGGGATGCGACGGTTGTAGCACAACATTTGACGACCAATGTCTTCA
CACACAGGGGTGGTGCCGTCCAGCTGAAGAAGCATGTTGGTCTTGAGGAGGTTCCTGGCACGCTCAACCTCACCCTCAGT
GACTGATGTGCAGAGCTTCATCCACTCCTTCTGGACATTGTACAGCATATCTTCCAACTGCATGGGTTCAGCTACAAAGT
AA




Most similar to sp|Q5REK3|MPPB_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit
           beta OS=Pongo abelii GN=PMPCB PE=2 SV=1
          Length = 489

 Score =  186 bits (471), Expect = 8e-47
 Identities = 86/123 (69%), Positives = 103/123 (83%)
 Frame = -2

Query: 481 YFVAEPMQLEDMLYNVQKEWMKLCTSVTEGEVERARNLLKTNMLLQLDGTTPVCEDIGRQ 302
           Y V EP  + DML+ VQKEWM+LCTSVTE EV RARNLLKTNMLLQLDG+TP+CEDIGRQ
Sbjct: 366 YMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQ 425

Query: 301 MLCYNRRIPIHELDARIEAVSVQNVRDVCYKYLYDRCPAVATVGPTEALPDYTRIRAGMY 122
           MLCYNRRIPI EL+ARI+AV+ + +R+VC KY+Y+R PA+A VGP E LPD+ +I + M 
Sbjct: 426 MLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDFKQICSNMC 485

Query: 121 WLR 113
           WLR
Sbjct: 486 WLR 488